Tools & Services
A list of computational pipelines, web servers and services developed by the research group
IsoMut
- fast variant calling tool
- isogenic samples
- non-human genomes as well
- somatic and germline mutations
- finetuning for high precision
CoVEO app
- SARS-CoV-2 sequencing data
- raw read datasets
- interactive visualizations
- filter for lineages
- filter for metadata
ViralPrimer
- SARS-CoV-2, monkeypox
- primer mapping
- validate primer efficiency
- find damaging mutations
- custom primers
Kooplex
- cloud-based analysis platform
- collaborative research
- modular framework
- jupyter notebooks, Rstudio
- interactive reports